BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037G05LP1|AL430432
(889 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig256 1151 0.0
3x_Contig240 410 e-114
>3x_Contig256
Length = 1226
Score = 1151 bits (576), Expect = 0.0
Identities = 596/608 (98%), Gaps = 1/608 (0%)
Strand = Plus / Minus
Query: 1 ccttgacagaagacggaaaagaatgggtaatacggtatgtaaagcccagttttgaaatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 ccttgacagaagacggaaaagaatgggtaatacggtatgtaaagcccagttttgaaatat 568
Query: 61 ttggagaagctttctctagaagggaagaattgtttgatgttggtcattttgcmaaatcgt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 567 ttggagaagctttctctagaagggaagaattgtttgatgttggtcattttgcaaaatcgt 508
Query: 121 atttgctaacccttttctctaamatctcttacctagatgacaaatcatatattcagctgc 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 507 atttgctaacccttttctctaaaatctcttacctagatgacaaatcatatattcagctgc 448
Query: 181 tcgaagcgcagttcttcccattatatcctgacaaacaatacctggacgaatttttgacgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tcgaagcgcagttcttcccattatatcctgacaaacaatacctggacgaatttttgacgg 388
Query: 241 ttcttgatcctagttacattgcmaaggttcatttggacttgttaamagaaaaagcattac 300
|||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 387 ttcttgatcctagttacattgcaaaggttcatttggacttgttaaaagaaaaagcattac 328
Query: 301 gtgcggggaatgttcatatgtttgtgaatctaataaaagatgaagactgctttgtgcaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gtgcggggaatgttcatatgtttgtgaatctaataaaagatgaagactgctttgtgcaat 268
Query: 361 taaaagacgaaataaattctaamaccttgaacgatatgccatacatagagaaaatgcttt 420
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 267 taaaagacgaaataaattctaaaaccttgaacgatatgccatacatagagaaaatgcttt 208
Query: 421 tgttagacggtctgactttmacttcatatggtattcaacacttgactagaaacatgccat 480
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 tgttagacggtctgactttaacttcatatggtattcaacacttgactagaaacatgccat 148
Query: 481 cagttatgaacagtataatcgatagtggaaatcaggttaccgammmattgtcgtttgact 540
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 147 cagttatgaacagtataatcgatagtggaaatcaggttaccgaaaaattgtcgtttgact 88
Query: 541 taagactgagggtcttcgagaaccttttggcagccaacccgcm-gagttgtccgtgtggt 599
|||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 87 taagactgagggtcttcgagaaccttttggaagccaacccgcaggagttgtccgtgtggt 28
Query: 600 tgattccg 607
||||||||
Sbjct: 27 tgattccg 20
>3x_Contig240
Length = 1244
Score = 410 bits (205), Expect = e-114
Identities = 208/209 (99%)
Strand = Plus / Minus
Query: 676 tgattatctatcagacatagattttgatgaagttacatatctttatatatatcatagata 735
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1244 tgattatctataagacatagattttgatgaagttacatatctttatatatatcatagata 1185
Query: 736 caacgagccagcagagacaatatctctgtgaatgaggtttaatgccgcttccatcttttc 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1184 caacgagccagcagagacaatatctctgtgaatgaggtttaatgccgcttccatcttttc 1125
Query: 796 ctttaatgtagcattaccaattgttttagacacatcgattagttccttgatcatctcttc 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1124 ctttaatgtagcattaccaattgttttagacacatcgattagttccttgatcatctcttc 1065
Query: 856 taatcttttgaacattctgatgagggaac 884
|||||||||||||||||||||||||||||
Sbjct: 1064 taatcttttgaacattctgatgagggaac 1036
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6301
Number of Sequences: 1807
Number of extensions: 6301
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 2
length of query: 889
length of database: 10,358,551
effective HSP length: 16
effective length of query: 873
effective length of database: 10,329,639
effective search space: 9017774847
effective search space used: 9017774847
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)